17c起草社区

Skip to main content

17c起草社区 News

Tracking down Hosta DNA

Saturday, July 10, 2010
Myrna Anderson

After four years of attempting to trace hosta ancestry through DNA fingerprinting, Dave Koetje has come to a conclusion: 鈥淗ostas are weird,鈥 he says.

Since 2002 Koetje, a 17c起草社区 College biology professor and director of the college鈥檚 biotechnology program, along with various student researchers, have been trying to track hosta parentage genetically, research that is funded by the and 17c起草社区鈥檚 science division and biology department.

The project is a collaboration with , a Zeeland-based perennial plant wholesaler, which grows its many varieties of hostas in tissue culture.

Koetje describes the process: 鈥淵ou take a little snip, and you plant it in the test tube or jar that has the growth medium in it. It鈥檚 not that different from how people usually propagate hostas. You鈥檝e got these hosta plants growing in your yard, and your neighbor comes over and says, 鈥榃ow! That鈥檚 a pretty one.鈥 And you say, 鈥業鈥檝e got to split it anyway.鈥 And you split it with a shovel.鈥

Walter鈥檚 Gardens expedites this process, he says, by propagating up to 50 hostas in one Mason jar from little snippets of plant material, using growth hormone.

鈥淭hey鈥檒l grow them, transplant them into a pot, transfer them into a greenhouse to raise them, and from there they sell them to a place like Flowerland," he says.

Hostas, whether grown in nature or in tissue culture regularly produce mutations or 鈥渟ports.鈥

Koetje notes that the mutant might have a new variegation pattern, or it might have some speckles on it, something that makes it stand out. The plant鈥檚 mutating tendency accounts for some 4500 varieties of hostas that have descended from a mere three or four hosta species.

鈥淭here are people who pay big bucks for the latest and greatest varieties,鈥 Koetje says.

Plant purveyors typically patent their new varieties, but it is difficult to distinguish a sport grown in one nursery from a sport grown in another.

Clarence Falstad, the tissue culture lab manager at Walter鈥檚 Gardens (and a 鈥渉osta guru鈥 according to Koetje), asked for help in determining hosta parentage genetically 鈥 to establish a hosta family tree 鈥 and the American Hosta Society contributed $5,500 to fund the project.

Koetje set out to determine how hostas are related to one another using Amplified Fragment Length Polymorphism (AFLP) or DNA fingerprinting.

鈥淵ou extract the DNA, cut it, make copies of it, separate the copies by size and from that construct a DNA fingerprint,鈥 Koetje explains.

At first, he and student researchers Sarah Weeda and Jody Mohle struggled because of low-quality DNA samples from hostas collected in the fall. Once they started using fresher hosta DNA, they encountered new complications: It seemed impossible to get a reliable DNA fingerprint from a hosta plant.

The team had to decide if this was a procedural glitch or did these plants have cells in them with slightly different amounts of DNA.

"After months of procedural optimization," says Koteje, "we gradually came to the conclusion that the DNA in hosta can vary from leaf to leaf in a single plant. People have known for years that some plants have different ploidy levels 鈥 different amounts of DNA in them. And yet the plant is just fine. Now, our bodies would freak out if that happened.鈥

He also found a parent hosta and its sport could have very different genetic makeup, a conclusion confirmed by the research of his colleague, John Beebe.

Beebe, who has taught biology at 17c起草社区 for so long that Koetje was once his student researcher, and Vonny Salim, his current student researcher, are using a flow cytometer (chromosomes are stained with a fluorescent compound, then the cells are passed single-file in front of a detector) to measure the amount of DNA in the cell nuclei of two hosta varieties: Regal Splendor and its parent plant, Krossa Regal.

鈥淩egal Splendor has twice the amount of DNA as Krossa Regal,鈥 says Beebe. 鈥淭here鈥檚 a lot more diversity than you鈥檇 expect.鈥

Koetje agrees.

鈥淲e think that what happens is that there is a wholesale chromosome rearrangement when a sport arises in culture,鈥 he says. 鈥淚t鈥檚 like a bomb goes off in a nucleus. It reminds us of what they鈥檙e discovering with cancer, but in this case, you don鈥檛 end up with runaway cell growth. You end up with slight changes in leaf pattern.鈥

By growing hostas in tissue culture Walter鈥檚 Garden鈥檚 inadvertently accelerates the mutating process.

鈥淚t鈥檚 happening more frequently in tissue culture in part because you鈥檙e doping them up on some hormones, and that makes the cells divide quickly, and when they divide quickly, they make genetic mistakes, Koetje says. 鈥淚t鈥檚 not entirely natural, but it鈥檚 not entirely unnatural either.鈥

He approached his hosta research, Koetje says, thinking that the mutations that occur to produce a sport would be so small that he wouldn鈥檛 be able to measure them only to find out the opposite was true.

鈥淭here鈥檚 such a big genetic change," he says, "I can鈥檛 tell if parents and children are related to each other.鈥

Koetje is still examining the procedure behind his research for possible glitches, even as he gradually concludes that the hosta family tree may be impossible to reconstruct.

鈥淧ractically, it doesn鈥檛 help the hosta industry at all,鈥 he says. 鈥淕enetically it鈥檚 a very interesting story. The biology of this turns out to be interesting and the practical stuff turns out to be a dead-end street. The plant kingdom has some surprises."

Beebe, a fan of hostas sees the benefit for a business like Walter鈥檚 Garden鈥檚.

鈥淭hey have a fantastic catalogue,鈥 he says.